Chapter 6. Readseq

Readseq is a classic, dating from 1989. Developed by Don Gilbert, this program reads and writes nucleotide and protein sequences in many useful formats. The Java version is the most current; we're using Version 2.

To run Readseq use:

java -cp readseq.jar run options inputfiles

For more details use:

java -cp readseq.jar help more

This chapter contains a list of the command line options used in Readseq.

Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312
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