preg searches for matches of a regular expression to a protein sequence.

Here is a sample session with preg:

% preg regular expression search of a protein sequence Input sequence(s): sw:*_rat Output file [100k_rat.preg]: stdout Regular expression pattern: IA[QWF]A

Mandatory qualifiers:

[-sequence] (seqall)

Sequence database USA.

[-pattern] (regexp)

Regular expression pattern.

[-outfile] (outfile)

Output filename.

Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

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