est2genome will align a set of spliced nucleotide sequences (ESTs, cDNAs, or mRNAs) to an unspliced genomic DNA sequence and insert introns of arbitrary length when needed. Here is a sample session with est2genome: % est2genome Align EST and genomic DNA sequences EST sequence(s): embl:hs989235 Genomic sequence: embl:hsnfg9 Output file [hs989235.est2genome]: Mandatory qualifiers:
Optional qualifiers:
Advanced qualifiers:
|