scopreso

scopreso

scopreso removes low resolution domains from a scop classification file.

This is part of Jon Ison's protein structure analysis package. This package is still being developed. Please ignore this program until further details can be documented. All further queries should go to Jon Ison (jison@hgmp.mrc.ac.uk).

Here is a sample session with scopreso:

% scopreso

Mandatory qualifiers:

[-cpdbpath] (string)

Location of domain coordinate files for input (EMBL-like format).

[-cpdbextn] (string)

Extension of coordinate files (EMBL-like format).

[-scopinf] (infile)

Name of SCOP data file for input (EMBL-like format).

-threshold (float)

Threshold for inclusion (Angstroms).

[-scopoutf] (outfile)

Name of SCOP data file for output.



Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

Similar book on Amazon

flylib.com © 2008-2017.
If you may any questions please contact us: flylib@qtcs.net