pepwindow reads in a protein sequence and displays a graph of the classic Kyte & Doolittle hydropathy plot of that protein.

Here is a sample session with pepwindow:

% pepwindow sw:hba_human Displays protein hydropathy Graph type [x11]:

Mandatory qualifiers:

[-sequencea] (sequence)

Sequence USA.

-graph (xygraph)

Graph type.

Optional qualifiers:

-datafile (datafile)

Nakai database file.

-length (integer)

Window size.

Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

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