antigenic

antigenic

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antigenic predicts potentially antigenic regions of a protein sequence.

Here is a sample session with antigenic:

% antigenic Finds antigenic sites in proteins Input sequence: sw:act1_fugru Minimum length [6]: Output file [act1_fugru.antigenic]:

Mandatory qualifiers:

[-sequence] (seqall)

Sequence database USA.

-minlen (integer)

Minimum length.

[-outfile] (report)

Output report filename.