pepstats

pepstats

pepstats outputs a report of simple protein sequence information such as molecular weight, number of residues, average residue weight, charge, isoelectric point, etc.

Here is a sample session with pepstats:

% pepstats Protein statistics Input sequence: sw:laci_ecoli Output file [laci_ecoli.pepstats]:

Mandatory qualifiers:

[-sequencea] (sequence)

Sequence USA.

-outfile (outfile)

Output filename.

Advanced qualifiers:

-[no]termini (boolean)

Include charge at N and C termini.

-aadata (string)

Molecular weight data for amino acids.



Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

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