plotorf

plotorf

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plotorf plots potential open reading frames.

Here is a sample session with plotorf:

% plotorf Plot potential open reading frames Input sequence: embl:paamir Graph type [x11]:

Specifying your own START and STOP codons with a mitochondrial sequence:

% plotorf -start ATT,ATC,ATA,ATG,GTG -stop TAA,TAG,AGA,AGG Plot potential open reading frames Input sequence: mito.seq Graph type [x11]:

Mandatory qualifiers:

[-sequence] (sequence)

Sequence USA.

-graph (xygraph)

Graph type.

Advanced qualifiers:

-start (string)

Start codons.

-stop (string)

Stop codons.