seqalign generate extended alignments for families in a scop families file by using ClustalW with seed alignments. This is part of Jon Ison's protein structure analysis package. This package is still being developed. Please ignore this program until further details can be documented. All further queries should go to Jon Ison (jison@hgmp.mrc.ac.uk). Here is a sample session with seqalign: % seqalign Mandatory qualifiers:
|