scopparse converts raw scop classification files to a file in EMBL-like format.

This is part of Jon Ison's protein structure analysis package. This package is still being developed. Please ignore this program until further details can be documented. All further queries should go to Jon Ison (

Here is a sample session with scopparse:

% scopparse

Mandatory qualifiers:

[-infilea] (infile)

Name of scop classification file (raw format dir.cla.scop.txt_X.XX for input).

[-infileb] (infile)

Name of scop description file (raw format dir.des.scop.txt_X.XX for input).

[-outfile] (outfile)

Name of scop classification file (EMBL format output).

Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

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