pscan

pscan

pscan scans proteins using PRINTS. The home web page of the PRINTS database is http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/.

Here is a sample session with pscan:

% pscan Scans proteins using PRINTS Input sequence(s): sw:OPSD_HUMAN Minimum number of elements per fingerprint [2]: Maximum number of elements per fingerprint [20]: Output file [opsd_human.pscan]:

Mandatory qualifiers:

[-sequence] (seqall)

Sequence database USA.

-emin (integer)

Minimum number of elements per fingerprint.

-emax (integer)

Maximum number of elements per fingerprint.

[-outfile] (outfile)

Output filename.



Sequence Analysis in a Nutshell
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases
ISBN: 059600494X
EAN: 2147483647
Year: 2005
Pages: 312

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